Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 AC105036.2-201ENST00000569468 176 ntBASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40ALP0C0E4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 AC068338.2-201ENST00000563278 1430 ntBASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 EP400NL-214ENST00000641289 2402 ntBASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 LINC00565-201ENST00000562710 2331 ntBASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40ALP0C0E4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 AC073210.2-201ENST00000430369 194 ntBASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40ALP0C0E4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 CD99P1-205ENST00000527459 561 ntBASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 AL138781.1-201ENST00000566567 1274 ntBASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 AC133041.1-202ENST00000642053 222 ntBASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40ALP0C0E4 KRT16P2-201ENST00000414673 1423 ntBASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 OR10C1-204ENST00000622521 1039 ntBASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40ALP0C0E4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 AC069152.1-201ENST00000438030 544 ntBASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms