Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 AC026271.2-201ENST00000428091 497 ntBASIC21.43■■□□□ 1.02
HLA-DQB2P05538 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 RARRES2P6-201ENST00000567333 442 ntBASIC21.43■■□□□ 1.02
HLA-DQB2P05538 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 KRT18P61-201ENST00000585825 1298 ntBASIC21.43■■□□□ 1.02
HLA-DQB2P05538 AC004854.2-201ENST00000608450 1441 ntBASIC21.43■■□□□ 1.02
HLA-DQB2P05538 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HLA-DQB2P05538 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 FEM1AP4-201ENST00000443167 1987 ntBASIC21.42■■□□□ 1.02
HLA-DQB2P05538 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DQB2P05538 AL137060.1-201ENST00000618151 2648 ntBASIC21.42■■□□□ 1.02
HLA-DQB2P05538 AL024507.2-201ENST00000606070 2574 ntBASIC21.42■■□□□ 1.02
HLA-DQB2P05538 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 AF106564.1-201ENST00000607058 2553 ntBASIC21.41■■□□□ 1.02
HLA-DQB2P05538 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 AC104187.1-201ENST00000607510 612 ntBASIC21.41■■□□□ 1.02
HLA-DQB2P05538 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQB2P05538 AP004607.4-201ENST00000530158 1459 ntBASIC21.4■■□□□ 1.02
HLA-DQB2P05538 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HLA-DQB2P05538 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
HLA-DQB2P05538 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.39■■□□□ 1.02
HLA-DQB2P05538 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 AC034268.1-201ENST00000441047 882 ntBASIC21.39■■□□□ 1.01
HLA-DQB2P05538 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DQB2P05538 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 AC138907.5-202ENST00000569484 235 ntBASIC21.38■■□□□ 1.01
HLA-DQB2P05538 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 AC061975.6-201ENST00000579045 1553 ntBASIC21.38■■□□□ 1.01
HLA-DQB2P05538 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 AC005229.4-201ENST00000610085 2198 ntBASIC21.38■■□□□ 1.01
HLA-DQB2P05538 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQB2P05538 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms