Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGN1P05114 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGN1P05114 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGN1P05114 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 DUX4L19-201ENST00000557448 1267 ntBASIC19.05■□□□□ 0.64
HMGN1P05114 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.05■□□□□ 0.64
HMGN1P05114 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGN1P05114 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGN1P05114 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HMGN1P05114 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 FEM1AP1-201ENST00000431297 1995 ntBASIC19.04■□□□□ 0.64
HMGN1P05114 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGN1P05114 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
HMGN1P05114 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGN1P05114 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGN1P05114 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.04■□□□□ 0.64
HMGN1P05114 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.04■□□□□ 0.64
HMGN1P05114 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HMGN1P05114 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGN1P05114 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGN1P05114 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGN1P05114 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGN1P05114 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGN1P05114 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGN1P05114 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGN1P05114 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGN1P05114 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGN1P05114 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGN1P05114 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HMGN1P05114 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGN1P05114 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGN1P05114 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGN1P05114 LINC01006-201ENST00000333319 2292 ntBASIC19.03■□□□□ 0.64
HMGN1P05114 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGN1P05114 SYT6-210ENST00000641643 1587 ntBASIC19.02■□□□□ 0.64
HMGN1P05114 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGN1P05114 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGN1P05114 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGN1P05114 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGN1P05114 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGN1P05114 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGN1P05114 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGN1P05114 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGN1P05114 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HMGN1P05114 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
HMGN1P05114 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HMGN1P05114 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGN1P05114 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGN1P05114 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGN1P05114 AP006587.3-201ENST00000525742 1516 ntBASIC19.01■□□□□ 0.63
HMGN1P05114 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGN1P05114 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HMGN1P05114 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGN1P05114 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGN1P05114 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HMGN1P05114 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMGN1P05114 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19■□□□□ 0.63
HMGN1P05114 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 SERBP1P1-201ENST00000396021 1160 ntBASIC19■□□□□ 0.63
HMGN1P05114 GRAMD4P7-201ENST00000578182 1232 ntBASIC19■□□□□ 0.63
HMGN1P05114 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19■□□□□ 0.63
HMGN1P05114 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19■□□□□ 0.63
HMGN1P05114 AL512631.2-201ENST00000604634 923 ntBASIC19■□□□□ 0.63
HMGN1P05114 AC136469.2-201ENST00000623944 1028 ntBASIC19■□□□□ 0.63
HMGN1P05114 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms