Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H2ABP04908 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2ABP04908 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H2ABP04908 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 AC110285.6-201ENST00000617652 491 ntBASIC19.17■□□□□ 0.66
HIST1H2ABP04908 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 AC105233.4-201ENST00000642045 216 ntBASIC19.17■□□□□ 0.66
HIST1H2ABP04908 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HIST1H2ABP04908 RASA4CP-201ENST00000424092 1398 ntBASIC19.17■□□□□ 0.66
HIST1H2ABP04908 AC009237.3-201ENST00000393279 1427 ntBASIC19.17■□□□□ 0.66
HIST1H2ABP04908 AC003102.1-202ENST00000563394 1796 ntBASIC19.16■□□□□ 0.66
HIST1H2ABP04908 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 AP006587.3-201ENST00000525742 1516 ntBASIC19.16■□□□□ 0.66
HIST1H2ABP04908 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 AP001330.3-201ENST00000520123 633 ntBASIC19.16■□□□□ 0.66
HIST1H2ABP04908 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H2ABP04908 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H2ABP04908 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
HIST1H2ABP04908 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HIST1H2ABP04908 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
HIST1H2ABP04908 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 AC091305.1-201ENST00000479476 895 ntBASIC19.14■□□□□ 0.65
HIST1H2ABP04908 AF213884.3-201ENST00000563833 479 ntBASIC19.14■□□□□ 0.65
HIST1H2ABP04908 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
HIST1H2ABP04908 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H2ABP04908 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 MIR939-201ENST00000401314 82 ntBASIC19.12■□□□□ 0.65
HIST1H2ABP04908 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 AL139246.5-201ENST00000606645 996 ntBASIC19.12■□□□□ 0.65
HIST1H2ABP04908 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H2ABP04908 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms