Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
OPN1SWP03999 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
OPN1SWP03999 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.65■□□□□ 0.74
OPN1SWP03999 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.65■□□□□ 0.74
OPN1SWP03999 LINC01006-201ENST00000333319 2292 ntBASIC19.65■□□□□ 0.74
OPN1SWP03999 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.65■□□□□ 0.74
OPN1SWP03999 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.65■□□□□ 0.74
OPN1SWP03999 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.65■□□□□ 0.74
OPN1SWP03999 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OPN1SWP03999 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN1SWP03999 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN1SWP03999 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
OPN1SWP03999 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN1SWP03999 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN1SWP03999 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN1SWP03999 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
OPN1SWP03999 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.64■□□□□ 0.73
OPN1SWP03999 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN1SWP03999 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.64■□□□□ 0.73
OPN1SWP03999 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN1SWP03999 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN1SWP03999 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN1SWP03999 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
OPN1SWP03999 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
OPN1SWP03999 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.63■□□□□ 0.73
OPN1SWP03999 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
OPN1SWP03999 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
OPN1SWP03999 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.63■□□□□ 0.73
OPN1SWP03999 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
OPN1SWP03999 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.63■□□□□ 0.73
OPN1SWP03999 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPN1SWP03999 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
OPN1SWP03999 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
OPN1SWP03999 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
OPN1SWP03999 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
OPN1SWP03999 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
OPN1SWP03999 AL136116.3-201ENST00000402907 1138 ntBASIC19.62■□□□□ 0.73
OPN1SWP03999 SMUG1P1-201ENST00000590640 811 ntBASIC19.62■□□□□ 0.73
OPN1SWP03999 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
OPN1SWP03999 LINC01521-201ENST00000504184 1943 ntBASIC19.62■□□□□ 0.73
OPN1SWP03999 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
OPN1SWP03999 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.62■□□□□ 0.73
OPN1SWP03999 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN1SWP03999 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
OPN1SWP03999 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 MIR4767-201ENST00000582827 78 ntBASIC19.61■□□□□ 0.73
OPN1SWP03999 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.61■□□□□ 0.73
OPN1SWP03999 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPN1SWP03999 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.6■□□□□ 0.73
OPN1SWP03999 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPN1SWP03999 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms