Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIC3O95833 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIC3O95833 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLIC3O95833 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIC3O95833 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIC3O95833 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
CLIC3O95833 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIC3O95833 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIC3O95833 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIC3O95833 AC012354.3-201ENST00000623734 483 ntBASIC19.45■□□□□ 0.7
CLIC3O95833 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIC3O95833 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLIC3O95833 OR7E47P-201ENST00000546390 1422 ntBASIC19.44■□□□□ 0.7
CLIC3O95833 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLIC3O95833 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.44■□□□□ 0.7
CLIC3O95833 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLIC3O95833 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLIC3O95833 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLIC3O95833 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIC3O95833 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
CLIC3O95833 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CLIC3O95833 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLIC3O95833 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLIC3O95833 AC009102.2-201ENST00000606772 1639 ntBASIC19.43■□□□□ 0.7
CLIC3O95833 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.43■□□□□ 0.7
CLIC3O95833 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLIC3O95833 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLIC3O95833 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLIC3O95833 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.43■□□□□ 0.7
CLIC3O95833 AC027702.1-201ENST00000563810 1770 ntBASIC19.43■□□□□ 0.7
CLIC3O95833 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.43■□□□□ 0.7
CLIC3O95833 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLIC3O95833 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.42■□□□□ 0.7
CLIC3O95833 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.42■□□□□ 0.7
CLIC3O95833 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC3O95833 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLIC3O95833 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.42■□□□□ 0.7
CLIC3O95833 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLIC3O95833 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLIC3O95833 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
CLIC3O95833 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLIC3O95833 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CLIC3O95833 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
CLIC3O95833 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CLIC3O95833 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.41■□□□□ 0.7
CLIC3O95833 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.41■□□□□ 0.7
CLIC3O95833 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC3O95833 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC3O95833 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.4■□□□□ 0.7
CLIC3O95833 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC3O95833 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLIC3O95833 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC3O95833 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms