Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP1R3DO95685 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP1R3DO95685 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PPP1R3DO95685 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19■□□□□ 0.63
PPP1R3DO95685 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 AC024257.2-201ENST00000549699 147 ntBASIC19■□□□□ 0.63
PPP1R3DO95685 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19■□□□□ 0.63
PPP1R3DO95685 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19■□□□□ 0.63
PPP1R3DO95685 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 AC126544.1-201ENST00000580842 1059 ntBASIC19■□□□□ 0.63
PPP1R3DO95685 AC233992.3-201ENST00000607491 485 ntBASIC19■□□□□ 0.63
PPP1R3DO95685 AL136162.1-201ENST00000607711 1078 ntBASIC19■□□□□ 0.63
PPP1R3DO95685 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19■□□□□ 0.63
PPP1R3DO95685 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19■□□□□ 0.63
PPP1R3DO95685 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19■□□□□ 0.63
PPP1R3DO95685 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP1R3DO95685 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 AC133561.4-201ENST00000566112 224 ntBASIC18.99■□□□□ 0.63
PPP1R3DO95685 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 AC073130.3-201ENST00000624389 2278 ntBASIC18.99■□□□□ 0.63
PPP1R3DO95685 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP1R3DO95685 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PPP1R3DO95685 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 SLC25A24-204ENST00000569674 2357 ntBASIC18.98■□□□□ 0.63
PPP1R3DO95685 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP1R3DO95685 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP1R3DO95685 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP1R3DO95685 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PPP1R3DO95685 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PPP1R3DO95685 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PPP1R3DO95685 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP1R3DO95685 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP1R3DO95685 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP1R3DO95685 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms