Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF11O60813 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEF11O60813 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF11O60813 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF11O60813 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEF11O60813 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEF11O60813 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 AC008175.2-201ENST00000612840 297 ntBASIC21.47■■□□□ 1.03
PRAMEF11O60813 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF11O60813 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF11O60813 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
PRAMEF11O60813 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 AC061975.6-201ENST00000579045 1553 ntBASIC21.46■■□□□ 1.03
PRAMEF11O60813 POU5F1P4-201ENST00000413175 1085 ntBASIC21.46■■□□□ 1.03
PRAMEF11O60813 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.46■■□□□ 1.03
PRAMEF11O60813 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.46■■□□□ 1.03
PRAMEF11O60813 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.46■■□□□ 1.03
PRAMEF11O60813 AC022517.1-201ENST00000592429 346 ntBASIC21.46■■□□□ 1.03
PRAMEF11O60813 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF11O60813 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
PRAMEF11O60813 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PRAMEF11O60813 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PRAMEF11O60813 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 KRT18P20-201ENST00000548986 1279 ntBASIC21.45■■□□□ 1.02
PRAMEF11O60813 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.45■■□□□ 1.02
PRAMEF11O60813 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.45■■□□□ 1.02
PRAMEF11O60813 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRAMEF11O60813 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
PRAMEF11O60813 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.44■■□□□ 1.02
PRAMEF11O60813 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.44■■□□□ 1.02
PRAMEF11O60813 Z98882.1-201ENST00000622160 2253 ntBASIC21.44■■□□□ 1.02
PRAMEF11O60813 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.44■■□□□ 1.02
PRAMEF11O60813 AC137761.2-201ENST00000561729 223 ntBASIC21.44■■□□□ 1.02
PRAMEF11O60813 AC145350.3-201ENST00000569033 163 ntBASIC21.44■■□□□ 1.02
PRAMEF11O60813 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF11O60813 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF11O60813 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF11O60813 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF11O60813 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF11O60813 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF11O60813 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PRAMEF11O60813 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF11O60813 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF11O60813 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 SLC7A5P2-201ENST00000553010 536 ntBASIC21.42■■□□□ 1.02
PRAMEF11O60813 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PRAMEF11O60813 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF11O60813 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF11O60813 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF11O60813 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF11O60813 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms