Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HCN1O60741 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
HCN1O60741 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.65■□□□□ 0.74
HCN1O60741 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.65■□□□□ 0.74
HCN1O60741 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.65■□□□□ 0.74
HCN1O60741 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCN1O60741 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HCN1O60741 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HCN1O60741 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCN1O60741 FAM99A-202ENST00000538190 1989 ntBASIC19.64■□□□□ 0.73
HCN1O60741 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HCN1O60741 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HCN1O60741 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HCN1O60741 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.63■□□□□ 0.73
HCN1O60741 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HCN1O60741 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.63■□□□□ 0.73
HCN1O60741 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.63■□□□□ 0.73
HCN1O60741 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HCN1O60741 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HCN1O60741 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.63■□□□□ 0.73
HCN1O60741 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HCN1O60741 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HCN1O60741 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.62■□□□□ 0.73
HCN1O60741 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.62■□□□□ 0.73
HCN1O60741 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.62■□□□□ 0.73
HCN1O60741 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
HCN1O60741 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HCN1O60741 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCN1O60741 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HCN1O60741 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.61■□□□□ 0.73
HCN1O60741 AL137784.2-201ENST00000607332 1000 ntBASIC19.61■□□□□ 0.73
HCN1O60741 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HCN1O60741 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.61■□□□□ 0.73
HCN1O60741 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HCN1O60741 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.61■□□□□ 0.73
HCN1O60741 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCN1O60741 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HCN1O60741 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HCN1O60741 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.6■□□□□ 0.73
HCN1O60741 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.6■□□□□ 0.73
HCN1O60741 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HCN1O60741 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCN1O60741 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
HCN1O60741 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.59■□□□□ 0.73
HCN1O60741 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.59■□□□□ 0.73
HCN1O60741 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.59■□□□□ 0.73
HCN1O60741 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
HCN1O60741 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HCN1O60741 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.59■□□□□ 0.73
HCN1O60741 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCN1O60741 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms