Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA3O60609 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.79■□□□□ 0.92
GFRA3O60609 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GFRA3O60609 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA3O60609 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
GFRA3O60609 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GFRA3O60609 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GFRA3O60609 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.78■□□□□ 0.92
GFRA3O60609 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.78■□□□□ 0.92
GFRA3O60609 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.78■□□□□ 0.92
GFRA3O60609 KRT126P-201ENST00000549467 1181 ntBASIC20.78■□□□□ 0.92
GFRA3O60609 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GFRA3O60609 MTDHP1-201ENST00000605323 784 ntBASIC20.78■□□□□ 0.92
GFRA3O60609 AC026471.5-201ENST00000615068 467 ntBASIC20.78■□□□□ 0.92
GFRA3O60609 AL589743.5-201ENST00000616611 1050 ntBASIC20.78■□□□□ 0.92
GFRA3O60609 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GFRA3O60609 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.78■□□□□ 0.92
GFRA3O60609 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA3O60609 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GFRA3O60609 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GFRA3O60609 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.77■□□□□ 0.92
GFRA3O60609 AC110285.5-201ENST00000611501 352 ntBASIC20.77■□□□□ 0.92
GFRA3O60609 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
GFRA3O60609 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GFRA3O60609 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
GFRA3O60609 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 AP003071.4-201ENST00000562276 1284 ntBASIC20.76■□□□□ 0.91
GFRA3O60609 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.76■□□□□ 0.91
GFRA3O60609 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GFRA3O60609 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GFRA3O60609 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA3O60609 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.75■□□□□ 0.91
GFRA3O60609 AP004607.7-201ENST00000527152 1677 ntBASIC20.75■□□□□ 0.91
GFRA3O60609 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 AC113347.1-201ENST00000413321 391 ntBASIC20.75■□□□□ 0.91
GFRA3O60609 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 UPK3BP1-201ENST00000428678 509 ntBASIC20.75■□□□□ 0.91
GFRA3O60609 RARRES2P10-201ENST00000564312 460 ntBASIC20.75■□□□□ 0.91
GFRA3O60609 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.75■□□□□ 0.91
GFRA3O60609 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.75■□□□□ 0.91
GFRA3O60609 AC243732.1-201ENST00000612648 864 ntBASIC20.75■□□□□ 0.91
GFRA3O60609 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.75■□□□□ 0.91
GFRA3O60609 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA3O60609 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 AC026396.1-201ENST00000419388 421 ntBASIC20.74■□□□□ 0.91
GFRA3O60609 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.74■□□□□ 0.91
GFRA3O60609 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.74■□□□□ 0.91
GFRA3O60609 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.74■□□□□ 0.91
GFRA3O60609 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA3O60609 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GFRA3O60609 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GFRA3O60609 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GFRA3O60609 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GFRA3O60609 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GFRA3O60609 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
GFRA3O60609 DUSP8P3-201ENST00000399571 1760 ntBASIC20.73■□□□□ 0.91
GFRA3O60609 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.73■□□□□ 0.91
GFRA3O60609 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GFRA3O60609 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GFRA3O60609 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GFRA3O60609 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.73■□□□□ 0.91
GFRA3O60609 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.73■□□□□ 0.91
GFRA3O60609 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.73■□□□□ 0.91
GFRA3O60609 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
GFRA3O60609 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
GFRA3O60609 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GFRA3O60609 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GFRA3O60609 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.72■□□□□ 0.91
GFRA3O60609 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GFRA3O60609 DUX4L26-201ENST00000489078 1255 ntBASIC20.72■□□□□ 0.91
GFRA3O60609 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
GFRA3O60609 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.72■□□□□ 0.91
GFRA3O60609 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.72■□□□□ 0.91
GFRA3O60609 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms