Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CCNT1O60563 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.01■■□□□ 1.43
CCNT1O60563 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CCNT1O60563 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CCNT1O60563 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24■■□□□ 1.43
CCNT1O60563 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24■■□□□ 1.43
CCNT1O60563 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24■■□□□ 1.43
CCNT1O60563 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24■■□□□ 1.43
CCNT1O60563 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24■■□□□ 1.43
CCNT1O60563 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24■■□□□ 1.43
CCNT1O60563 AL162430.1-201ENST00000480705 870 ntBASIC24■■□□□ 1.43
CCNT1O60563 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24■■□□□ 1.43
CCNT1O60563 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24■■□□□ 1.43
CCNT1O60563 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24■■□□□ 1.43
CCNT1O60563 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24■■□□□ 1.43
CCNT1O60563 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CCNT1O60563 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24■■□□□ 1.43
CCNT1O60563 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CCNT1O60563 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNT1O60563 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNT1O60563 Z98882.1-201ENST00000622160 2253 ntBASIC23.99■■□□□ 1.43
CCNT1O60563 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNT1O60563 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.99■■□□□ 1.43
CCNT1O60563 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNT1O60563 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.99■■□□□ 1.43
CCNT1O60563 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.99■■□□□ 1.43
CCNT1O60563 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNT1O60563 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.99■■□□□ 1.43
CCNT1O60563 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.98■■□□□ 1.43
CCNT1O60563 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CCNT1O60563 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CCNT1O60563 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CCNT1O60563 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.98■■□□□ 1.43
CCNT1O60563 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
CCNT1O60563 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.98■■□□□ 1.43
CCNT1O60563 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.98■■□□□ 1.43
CCNT1O60563 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNT1O60563 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
CCNT1O60563 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCNT1O60563 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCNT1O60563 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.97■■□□□ 1.43
CCNT1O60563 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCNT1O60563 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.97■■□□□ 1.43
CCNT1O60563 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CCNT1O60563 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.97■■□□□ 1.43
CCNT1O60563 AC138907.5-202ENST00000569484 235 ntBASIC23.97■■□□□ 1.43
CCNT1O60563 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.96■■□□□ 1.43
CCNT1O60563 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
CCNT1O60563 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
CCNT1O60563 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.96■■□□□ 1.43
CCNT1O60563 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.96■■□□□ 1.43
CCNT1O60563 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.96■■□□□ 1.43
CCNT1O60563 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.96■■□□□ 1.43
CCNT1O60563 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CCNT1O60563 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCNT1O60563 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CCNT1O60563 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.95■■□□□ 1.42
CCNT1O60563 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
CCNT1O60563 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.95■■□□□ 1.42
CCNT1O60563 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCNT1O60563 KRT19P1-201ENST00000405746 1186 ntBASIC23.95■■□□□ 1.42
CCNT1O60563 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCNT1O60563 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.95■■□□□ 1.42
CCNT1O60563 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNT1O60563 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCNT1O60563 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.94■■□□□ 1.42
CCNT1O60563 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.94■■□□□ 1.42
CCNT1O60563 AP001160.3-201ENST00000601484 763 ntBASIC23.94■■□□□ 1.42
CCNT1O60563 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CCNT1O60563 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNT1O60563 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNT1O60563 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.94■■□□□ 1.42
CCNT1O60563 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNT1O60563 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CCNT1O60563 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms