Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.93■□□□□ 0.78
URB1O60287 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
URB1O60287 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 AP004607.7-201ENST00000527152 1677 ntBASIC19.93■□□□□ 0.78
URB1O60287 AC142381.3-201ENST00000568208 1670 ntBASIC19.93■□□□□ 0.78
URB1O60287 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.92■□□□□ 0.78
URB1O60287 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
URB1O60287 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
URB1O60287 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
URB1O60287 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
URB1O60287 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.91■□□□□ 0.78
URB1O60287 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.91■□□□□ 0.78
URB1O60287 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.91■□□□□ 0.78
URB1O60287 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.91■□□□□ 0.78
URB1O60287 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.91■□□□□ 0.78
URB1O60287 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
URB1O60287 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
URB1O60287 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
URB1O60287 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
URB1O60287 KRT17P3-201ENST00000420566 1262 ntBASIC19.9■□□□□ 0.78
URB1O60287 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.9■□□□□ 0.78
URB1O60287 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.9■□□□□ 0.78
URB1O60287 AL591742.1-201ENST00000604433 565 ntBASIC19.9■□□□□ 0.78
URB1O60287 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
URB1O60287 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
URB1O60287 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
URB1O60287 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
URB1O60287 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
URB1O60287 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.89■□□□□ 0.78
URB1O60287 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.89■□□□□ 0.77
URB1O60287 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.89■□□□□ 0.77
URB1O60287 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.89■□□□□ 0.77
URB1O60287 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
URB1O60287 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
URB1O60287 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.89■□□□□ 0.77
URB1O60287 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
URB1O60287 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.88■□□□□ 0.77
URB1O60287 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.88■□□□□ 0.77
URB1O60287 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
URB1O60287 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 POU5F1P4-201ENST00000413175 1085 ntBASIC19.88■□□□□ 0.77
URB1O60287 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 AC120498.10-201ENST00000621827 505 ntBASIC19.88■□□□□ 0.77
URB1O60287 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 RBM17P2-201ENST00000616397 1405 ntBASIC19.88■□□□□ 0.77
URB1O60287 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
URB1O60287 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
URB1O60287 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
URB1O60287 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
URB1O60287 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.87■□□□□ 0.77
URB1O60287 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.87■□□□□ 0.77
URB1O60287 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.87■□□□□ 0.77
URB1O60287 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.87■□□□□ 0.77
URB1O60287 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.87■□□□□ 0.77
URB1O60287 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms