Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PKD1P6-201ENST00000343738 4769 ntBASIC18.9■□□□□ 0.62
CXCL13O43927 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CXCL13O43927 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.9■□□□□ 0.62
CXCL13O43927 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.9■□□□□ 0.62
CXCL13O43927 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CXCL13O43927 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCL13O43927 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL13O43927 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.89■□□□□ 0.62
CXCL13O43927 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.89■□□□□ 0.61
CXCL13O43927 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CXCL13O43927 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.89■□□□□ 0.61
CXCL13O43927 KRT18P11-201ENST00000435214 1283 ntBASIC18.89■□□□□ 0.61
CXCL13O43927 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.89■□□□□ 0.61
CXCL13O43927 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.89■□□□□ 0.61
CXCL13O43927 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.89■□□□□ 0.61
CXCL13O43927 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.89■□□□□ 0.61
CXCL13O43927 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CXCL13O43927 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CXCL13O43927 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.89■□□□□ 0.61
CXCL13O43927 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CXCL13O43927 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.89■□□□□ 0.61
CXCL13O43927 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CXCL13O43927 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL13O43927 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CXCL13O43927 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.88■□□□□ 0.61
CXCL13O43927 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.88■□□□□ 0.61
CXCL13O43927 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 KRT18P20-201ENST00000548986 1279 ntBASIC18.88■□□□□ 0.61
CXCL13O43927 SLC7A5P2-201ENST00000553010 536 ntBASIC18.88■□□□□ 0.61
CXCL13O43927 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CXCL13O43927 FBXW4P1-201ENST00000426721 2239 ntBASIC18.88■□□□□ 0.61
CXCL13O43927 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCL13O43927 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 POU5F1P4-201ENST00000413175 1085 ntBASIC18.87■□□□□ 0.61
CXCL13O43927 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.87■□□□□ 0.61
CXCL13O43927 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.87■□□□□ 0.61
CXCL13O43927 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 AC061975.6-201ENST00000579045 1553 ntBASIC18.87■□□□□ 0.61
CXCL13O43927 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCL13O43927 BID-214ENST00000617586 542 ntTSL 5 BASIC18.87■□□□□ 0.61
CXCL13O43927 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
CXCL13O43927 AC120498.10-201ENST00000621827 505 ntBASIC18.87■□□□□ 0.61
CXCL13O43927 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CXCL13O43927 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CXCL13O43927 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
CXCL13O43927 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
CXCL13O43927 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CXCL13O43927 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.86■□□□□ 0.61
CXCL13O43927 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CXCL13O43927 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.86■□□□□ 0.61
CXCL13O43927 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 MYCNOS-205ENST00000641950 531 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms