Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VEGFDO43915 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VEGFDO43915 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
VEGFDO43915 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.74■□□□□ 0.91
VEGFDO43915 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.74■□□□□ 0.91
VEGFDO43915 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.74■□□□□ 0.91
VEGFDO43915 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.74■□□□□ 0.91
VEGFDO43915 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
VEGFDO43915 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.74■□□□□ 0.91
VEGFDO43915 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.74■□□□□ 0.91
VEGFDO43915 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
VEGFDO43915 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
VEGFDO43915 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFDO43915 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VEGFDO43915 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.73■□□□□ 0.91
VEGFDO43915 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 AC011767.1-201ENST00000617410 1153 ntBASIC20.73■□□□□ 0.91
VEGFDO43915 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VEGFDO43915 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
VEGFDO43915 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VEGFDO43915 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
VEGFDO43915 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.73■□□□□ 0.91
VEGFDO43915 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFDO43915 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.72■□□□□ 0.91
VEGFDO43915 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.72■□□□□ 0.91
VEGFDO43915 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 MFSD11-216ENST00000590393 1141 ntBASIC20.72■□□□□ 0.91
VEGFDO43915 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 AC080038.1-201ENST00000611274 1154 ntBASIC20.72■□□□□ 0.91
VEGFDO43915 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.72■□□□□ 0.91
VEGFDO43915 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
VEGFDO43915 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
VEGFDO43915 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VEGFDO43915 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
VEGFDO43915 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VEGFDO43915 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VEGFDO43915 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFDO43915 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VEGFDO43915 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 AC244015.2-201ENST00000616358 1861 ntBASIC20.71■□□□□ 0.91
VEGFDO43915 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFDO43915 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.71■□□□□ 0.91
VEGFDO43915 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
VEGFDO43915 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.71■□□□□ 0.91
VEGFDO43915 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.71■□□□□ 0.91
VEGFDO43915 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.71■□□□□ 0.91
VEGFDO43915 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFDO43915 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.71■□□□□ 0.91
VEGFDO43915 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFDO43915 AC079834.2-201ENST00000609776 1949 ntBASIC20.7■□□□□ 0.91
VEGFDO43915 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
VEGFDO43915 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.7■□□□□ 0.9
VEGFDO43915 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
VEGFDO43915 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.7■□□□□ 0.9
VEGFDO43915 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.7■□□□□ 0.9
VEGFDO43915 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
VEGFDO43915 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms