Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRICKLE3O43900 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRICKLE3O43900 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRICKLE3O43900 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.31■□□□□ 0.84
PRICKLE3O43900 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRICKLE3O43900 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRICKLE3O43900 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
PRICKLE3O43900 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRICKLE3O43900 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRICKLE3O43900 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 AC061975.6-201ENST00000579045 1553 ntBASIC20.3■□□□□ 0.84
PRICKLE3O43900 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 POU5F1P4-201ENST00000413175 1085 ntBASIC20.3■□□□□ 0.84
PRICKLE3O43900 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 SLC7A5P2-201ENST00000553010 536 ntBASIC20.3■□□□□ 0.84
PRICKLE3O43900 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRICKLE3O43900 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
PRICKLE3O43900 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.29■□□□□ 0.84
PRICKLE3O43900 AC008175.2-201ENST00000612840 297 ntBASIC20.29■□□□□ 0.84
PRICKLE3O43900 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.29■□□□□ 0.84
PRICKLE3O43900 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
PRICKLE3O43900 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRICKLE3O43900 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.29■□□□□ 0.84
PRICKLE3O43900 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
PRICKLE3O43900 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.28■□□□□ 0.84
PRICKLE3O43900 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.28■□□□□ 0.84
PRICKLE3O43900 SLC7A5P1-201ENST00000568957 537 ntBASIC20.28■□□□□ 0.84
PRICKLE3O43900 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.28■□□□□ 0.84
PRICKLE3O43900 UBE2DNL-204ENST00000602536 740 ntBASIC20.28■□□□□ 0.84
PRICKLE3O43900 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.28■□□□□ 0.84
PRICKLE3O43900 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE3O43900 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.27■□□□□ 0.84
PRICKLE3O43900 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.27■□□□□ 0.84
PRICKLE3O43900 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.27■□□□□ 0.84
PRICKLE3O43900 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.27■□□□□ 0.84
PRICKLE3O43900 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.27■□□□□ 0.84
PRICKLE3O43900 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE3O43900 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRICKLE3O43900 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRICKLE3O43900 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.27■□□□□ 0.83
PRICKLE3O43900 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 AC016769.1-201ENST00000409132 1010 ntBASIC20.26■□□□□ 0.83
PRICKLE3O43900 KRT18P11-201ENST00000435214 1283 ntBASIC20.26■□□□□ 0.83
PRICKLE3O43900 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 AL137784.2-201ENST00000607332 1000 ntBASIC20.26■□□□□ 0.83
PRICKLE3O43900 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms