Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF9O43307 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF9O43307 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
ARHGEF9O43307 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF9O43307 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF9O43307 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 AC099791.1-201ENST00000416440 715 ntBASIC19.4■□□□□ 0.7
ARHGEF9O43307 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 AL031602.1-201ENST00000633169 911 ntBASIC19.4■□□□□ 0.7
ARHGEF9O43307 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.4■□□□□ 0.7
ARHGEF9O43307 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF9O43307 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ARHGEF9O43307 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
ARHGEF9O43307 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ARHGEF9O43307 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.39■□□□□ 0.69
ARHGEF9O43307 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF9O43307 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF9O43307 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF9O43307 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.37■□□□□ 0.69
ARHGEF9O43307 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF9O43307 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF9O43307 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ARHGEF9O43307 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ARHGEF9O43307 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ARHGEF9O43307 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.36■□□□□ 0.69
ARHGEF9O43307 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF9O43307 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms