Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN2O15020 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN2O15020 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN2O15020 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN2O15020 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN2O15020 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPTBN2O15020 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 AC133681.1-201ENST00000465482 601 ntBASIC20.29■□□□□ 0.84
SPTBN2O15020 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTBN2O15020 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTBN2O15020 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SPTBN2O15020 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTBN2O15020 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTBN2O15020 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTBN2O15020 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTBN2O15020 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTBN2O15020 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN2O15020 KRT16P2-201ENST00000414673 1423 ntBASIC20.28■□□□□ 0.84
SPTBN2O15020 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.28■□□□□ 0.84
SPTBN2O15020 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.28■□□□□ 0.84
SPTBN2O15020 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.28■□□□□ 0.84
SPTBN2O15020 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.28■□□□□ 0.84
SPTBN2O15020 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 AC239809.2-201ENST00000415381 517 ntBASIC20.28■□□□□ 0.84
SPTBN2O15020 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SPTBN2O15020 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SPTBN2O15020 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.28■□□□□ 0.84
SPTBN2O15020 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN2O15020 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.28■□□□□ 0.84
SPTBN2O15020 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SPTBN2O15020 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTBN2O15020 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.27■□□□□ 0.84
SPTBN2O15020 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTBN2O15020 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTBN2O15020 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTBN2O15020 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN2O15020 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.27■□□□□ 0.83
SPTBN2O15020 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.27■□□□□ 0.83
SPTBN2O15020 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.27■□□□□ 0.83
SPTBN2O15020 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.27■□□□□ 0.83
SPTBN2O15020 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPTBN2O15020 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
SPTBN2O15020 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPTBN2O15020 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTBN2O15020 KRT126P-201ENST00000549467 1181 ntBASIC20.26■□□□□ 0.83
SPTBN2O15020 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPTBN2O15020 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPTBN2O15020 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPTBN2O15020 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN2O15020 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.26■□□□□ 0.83
SPTBN2O15020 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.25■□□□□ 0.83
SPTBN2O15020 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SPTBN2O15020 AC113347.1-201ENST00000413321 391 ntBASIC20.25■□□□□ 0.83
SPTBN2O15020 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.25■□□□□ 0.83
SPTBN2O15020 AC145285.6-201ENST00000604632 637 ntBASIC20.25■□□□□ 0.83
SPTBN2O15020 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SPTBN2O15020 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN2O15020 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SPTBN2O15020 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms