Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL591742.1-201ENST00000604433 565 ntBASIC24.23■■□□□ 1.47
ATP2A1O14983 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
ATP2A1O14983 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP2A1O14983 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP2A1O14983 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.22■■□□□ 1.47
ATP2A1O14983 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP2A1O14983 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP2A1O14983 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP2A1O14983 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
ATP2A1O14983 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP2A1O14983 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.22■■□□□ 1.47
ATP2A1O14983 AC016405.3-201ENST00000607710 860 ntBASIC24.22■■□□□ 1.47
ATP2A1O14983 AC092118.2-201ENST00000613495 667 ntBASIC24.22■■□□□ 1.47
ATP2A1O14983 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP2A1O14983 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP2A1O14983 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP2A1O14983 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ATP2A1O14983 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ATP2A1O14983 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.21■■□□□ 1.47
ATP2A1O14983 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.21■■□□□ 1.47
ATP2A1O14983 TSPY20P-201ENST00000450910 630 ntBASIC24.21■■□□□ 1.47
ATP2A1O14983 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.21■■□□□ 1.47
ATP2A1O14983 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.21■■□□□ 1.47
ATP2A1O14983 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP2A1O14983 AC080038.3-201ENST00000623346 1952 ntBASIC24.21■■□□□ 1.47
ATP2A1O14983 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ATP2A1O14983 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP2A1O14983 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP2A1O14983 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.2■■□□□ 1.46
ATP2A1O14983 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ATP2A1O14983 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.2■■□□□ 1.46
ATP2A1O14983 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.2■■□□□ 1.46
ATP2A1O14983 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.2■■□□□ 1.46
ATP2A1O14983 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ATP2A1O14983 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ATP2A1O14983 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
ATP2A1O14983 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.19■■□□□ 1.46
ATP2A1O14983 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.19■■□□□ 1.46
ATP2A1O14983 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.19■■□□□ 1.46
ATP2A1O14983 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP2A1O14983 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.18■■□□□ 1.46
ATP2A1O14983 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.18■■□□□ 1.46
ATP2A1O14983 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP2A1O14983 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
ATP2A1O14983 RARRES2P4-201ENST00000514074 484 ntBASIC24.18■■□□□ 1.46
ATP2A1O14983 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP2A1O14983 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.18■■□□□ 1.46
ATP2A1O14983 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
ATP2A1O14983 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.18■■□□□ 1.46
ATP2A1O14983 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
ATP2A1O14983 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP2A1O14983 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP2A1O14983 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.17■■□□□ 1.46
ATP2A1O14983 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ATP2A1O14983 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ATP2A1O14983 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
ATP2A1O14983 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.17■■□□□ 1.46
ATP2A1O14983 C1orf229-201ENST00000623686 2258 ntBASIC24.17■■□□□ 1.46
ATP2A1O14983 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.17■■□□□ 1.46
ATP2A1O14983 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.17■■□□□ 1.46
ATP2A1O14983 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.17■■□□□ 1.46
ATP2A1O14983 MIR4651-201ENST00000582622 73 ntBASIC24.17■■□□□ 1.46
ATP2A1O14983 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
ATP2A1O14983 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
ATP2A1O14983 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.16■■□□□ 1.46
ATP2A1O14983 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ATP2A1O14983 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP2A1O14983 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.16■■□□□ 1.46
ATP2A1O14983 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP2A1O14983 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATP2A1O14983 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
ATP2A1O14983 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP2A1O14983 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP2A1O14983 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.15■■□□□ 1.46
ATP2A1O14983 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP2A1O14983 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP2A1O14983 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP2A1O14983 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP2A1O14983 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.15■■□□□ 1.46
ATP2A1O14983 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
ATP2A1O14983 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms