Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
UBFD1O14562 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UBFD1O14562 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.47■□□□□ 0.87
UBFD1O14562 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.47■□□□□ 0.87
UBFD1O14562 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBFD1O14562 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.47■□□□□ 0.87
UBFD1O14562 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.47■□□□□ 0.87
UBFD1O14562 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
UBFD1O14562 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.47■□□□□ 0.87
UBFD1O14562 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.47■□□□□ 0.87
UBFD1O14562 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
UBFD1O14562 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBFD1O14562 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.47■□□□□ 0.87
UBFD1O14562 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.46■□□□□ 0.87
UBFD1O14562 PLK5-205ENST00000642079 1969 ntBASIC20.46■□□□□ 0.87
UBFD1O14562 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBFD1O14562 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.46■□□□□ 0.87
UBFD1O14562 IGHV3-19-201ENST00000521488 291 ntBASIC20.46■□□□□ 0.87
UBFD1O14562 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 AC126544.1-201ENST00000580842 1059 ntBASIC20.46■□□□□ 0.87
UBFD1O14562 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.46■□□□□ 0.87
UBFD1O14562 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBFD1O14562 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.46■□□□□ 0.87
UBFD1O14562 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.46■□□□□ 0.87
UBFD1O14562 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBFD1O14562 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
UBFD1O14562 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UBFD1O14562 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.45■□□□□ 0.86
UBFD1O14562 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.45■□□□□ 0.86
UBFD1O14562 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.45■□□□□ 0.86
UBFD1O14562 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 AC135279.3-201ENST00000610945 1311 ntBASIC20.45■□□□□ 0.86
UBFD1O14562 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.45■□□□□ 0.86
UBFD1O14562 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.45■□□□□ 0.86
UBFD1O14562 AC055733.4-201ENST00000638462 1354 ntBASIC20.45■□□□□ 0.86
UBFD1O14562 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBFD1O14562 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBFD1O14562 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.44■□□□□ 0.86
UBFD1O14562 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBFD1O14562 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.44■□□□□ 0.86
UBFD1O14562 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.44■□□□□ 0.86
UBFD1O14562 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.44■□□□□ 0.86
UBFD1O14562 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.44■□□□□ 0.86
UBFD1O14562 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBFD1O14562 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.44■□□□□ 0.86
UBFD1O14562 AC092667.1-201ENST00000434301 2586 ntBASIC20.43■□□□□ 0.86
UBFD1O14562 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.43■□□□□ 0.86
UBFD1O14562 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.43■□□□□ 0.86
UBFD1O14562 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBFD1O14562 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.43■□□□□ 0.86
UBFD1O14562 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.43■□□□□ 0.86
UBFD1O14562 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBFD1O14562 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UBFD1O14562 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms