Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 KRT87P-202ENST00000534226 1464 ntBASIC16.2■□□□□ 0.18
NDUFA4O00483 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.2■□□□□ 0.18
NDUFA4O00483 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA4O00483 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA4O00483 AC026310.3-201ENST00000625186 2373 ntBASIC16.2■□□□□ 0.18
NDUFA4O00483 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NDUFA4O00483 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.19■□□□□ 0.18
NDUFA4O00483 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA4O00483 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.19■□□□□ 0.18
NDUFA4O00483 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.19■□□□□ 0.18
NDUFA4O00483 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA4O00483 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
NDUFA4O00483 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.19■□□□□ 0.18
NDUFA4O00483 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA4O00483 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NDUFA4O00483 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.18■□□□□ 0.18
NDUFA4O00483 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA4O00483 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDUFA4O00483 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.18■□□□□ 0.18
NDUFA4O00483 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDUFA4O00483 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NDUFA4O00483 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFA4O00483 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
NDUFA4O00483 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NDUFA4O00483 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFA4O00483 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.17■□□□□ 0.18
NDUFA4O00483 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.17■□□□□ 0.18
NDUFA4O00483 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDUFA4O00483 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 AC007375.3-201ENST00000600936 2314 ntBASIC16.17■□□□□ 0.18
NDUFA4O00483 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFA4O00483 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFA4O00483 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA4O00483 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA4O00483 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA4O00483 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDUFA4O00483 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDUFA4O00483 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.16■□□□□ 0.18
NDUFA4O00483 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFA4O00483 TERF1P2-201ENST00000583350 1212 ntBASIC16.16■□□□□ 0.18
NDUFA4O00483 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFA4O00483 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA4O00483 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA4O00483 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NDUFA4O00483 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA4O00483 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NDUFA4O00483 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFA4O00483 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFA4O00483 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFA4O00483 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFA4O00483 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.15■□□□□ 0.18
NDUFA4O00483 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NDUFA4O00483 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA4O00483 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
NDUFA4O00483 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms