Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SMIM1B2RUZ4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 AL033527.3-201ENST00000566366 1196 ntBASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 AL117332.1-201ENST00000622628 974 ntBASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM1B2RUZ4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 AC010997.5-201ENST00000609182 354 ntBASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 pRNA.6-201ENST00000610482 90 ntBASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 pRNA.5-201ENST00000612139 90 ntBASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 pRNA.11-201ENST00000618423 90 ntBASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 pRNA.13-201ENST00000619112 90 ntBASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM1B2RUZ4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 AC010141.3-201ENST00000456659 717 ntBASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM1B2RUZ4 AL391422.3-201ENST00000603791 2761 ntBASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM1B2RUZ4 PLK5-205ENST00000642079 1969 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms