Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 AL137784.2-201ENST00000607332 1000 ntBASIC16.68■□□□□ 0.26
LINC01548A6NM66 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 AC016769.1-201ENST00000409132 1010 ntBASIC16.67■□□□□ 0.26
LINC01548A6NM66 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 AC010141.2-201ENST00000452426 721 ntBASIC16.67■□□□□ 0.26
LINC01548A6NM66 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 SLC7A5P2-201ENST00000553010 536 ntBASIC16.67■□□□□ 0.26
LINC01548A6NM66 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 AC061975.6-201ENST00000579045 1553 ntBASIC16.67■□□□□ 0.26
LINC01548A6NM66 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LINC01548A6NM66 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01548A6NM66 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 AC006015.1-201ENST00000429970 570 ntBASIC16.66■□□□□ 0.26
LINC01548A6NM66 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01548A6NM66 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LINC01548A6NM66 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC01548A6NM66 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 UBE2DNL-204ENST00000602536 740 ntBASIC16.65■□□□□ 0.26
LINC01548A6NM66 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01548A6NM66 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LINC01548A6NM66 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.64■□□□□ 0.26
LINC01548A6NM66 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.64■□□□□ 0.25
LINC01548A6NM66 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 AC011767.1-201ENST00000617410 1153 ntBASIC16.64■□□□□ 0.25
LINC01548A6NM66 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01548A6NM66 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01548A6NM66 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms