Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AC121338.2-201ENST00000622535 1744 ntBASIC14.95□□□□□ -0.02
LINC01546A6NGU7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AC129492.7-201ENST00000622992 756 ntBASIC14.95□□□□□ -0.02
LINC01546A6NGU7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 RNF126P1-201ENST00000567452 1320 ntBASIC14.94□□□□□ -0.02
LINC01546A6NGU7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 MIR7108-201ENST00000614319 87 ntBASIC14.94□□□□□ -0.02
LINC01546A6NGU7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01546A6NGU7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 AC112907.3-201ENST00000577781 2400 ntBASIC14.93□□□□□ -0.02
LINC01546A6NGU7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01546A6NGU7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 AC116562.4-201ENST00000641316 2276 ntBASIC14.92□□□□□ -0.02
LINC01546A6NGU7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01546A6NGU7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms