Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SH3D21A4FU49 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.5■□□□□ 0.71
SH3D21A4FU49 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.5■□□□□ 0.71
SH3D21A4FU49 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3D21A4FU49 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SH3D21A4FU49 AC133637.1-201ENST00000624115 1537 ntBASIC19.5■□□□□ 0.71
SH3D21A4FU49 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SH3D21A4FU49 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3D21A4FU49 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3D21A4FU49 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 AC092667.1-201ENST00000434301 2586 ntBASIC19.49■□□□□ 0.71
SH3D21A4FU49 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3D21A4FU49 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3D21A4FU49 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3D21A4FU49 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3D21A4FU49 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3D21A4FU49 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SH3D21A4FU49 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 AC034268.1-201ENST00000441047 882 ntBASIC19.48■□□□□ 0.71
SH3D21A4FU49 YBX1P1-201ENST00000445822 960 ntBASIC19.48■□□□□ 0.71
SH3D21A4FU49 IGHV3-19-201ENST00000521488 291 ntBASIC19.48■□□□□ 0.71
SH3D21A4FU49 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
SH3D21A4FU49 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3D21A4FU49 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3D21A4FU49 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SH3D21A4FU49 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3D21A4FU49 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.46■□□□□ 0.71
SH3D21A4FU49 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.46■□□□□ 0.71
SH3D21A4FU49 AL499627.2-201ENST00000606283 725 ntBASIC19.46■□□□□ 0.71
SH3D21A4FU49 AL358852.1-201ENST00000623174 1268 ntBASIC19.46■□□□□ 0.71
SH3D21A4FU49 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SH3D21A4FU49 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3D21A4FU49 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3D21A4FU49 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SH3D21A4FU49 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SH3D21A4FU49 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SH3D21A4FU49 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms