Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 Z92544.1-202ENST00000571933 1220 ntBASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 TSPY13P-201ENST00000338964 914 ntBASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRBV3S1A0A5B6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.77■□□□□ 0.75
TCRBV3S1A0A5B6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TCRBV3S1A0A5B6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.77■□□□□ 0.75
TCRBV3S1A0A5B6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 AL034346.1-201ENST00000568244 1277 ntBASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV3S1A0A5B6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 AL162377.1-201ENST00000618844 1793 ntBASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TCRBV3S1A0A5B6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV3S1A0A5B6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBV3S1A0A5B6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms