Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 AC083906.2-201ENST00000511578 360 ntBASIC17.13■□□□□ 0.33
CENPVL3A0A0U1RRI6 AL121832.2-201ENST00000610979 668 ntBASIC17.13■□□□□ 0.33
CENPVL3A0A0U1RRI6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CENPVL3A0A0U1RRI6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPVL3A0A0U1RRI6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPVL3A0A0U1RRI6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CENPVL3A0A0U1RRI6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPVL3A0A0U1RRI6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 AL355802.2-201ENST00000402069 882 ntBASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 AC007322.4-201ENST00000509611 723 ntBASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CENPVL3A0A0U1RRI6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 AC068338.2-201ENST00000563278 1430 ntBASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CENPVL3A0A0U1RRI6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CENPVL3A0A0U1RRI6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CENPVL3A0A0U1RRI6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CENPVL3A0A0U1RRI6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CENPVL3A0A0U1RRI6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.08■□□□□ 0.33
CENPVL3A0A0U1RRI6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 TSPY6P-201ENST00000448518 926 ntBASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 AF201337.1-201ENST00000520239 748 ntBASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 AC133552.2-202ENST00000575694 574 ntBASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CENPVL3A0A0U1RRI6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 RBM17P2-201ENST00000616397 1405 ntBASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CENPVL3A0A0U1RRI6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms