Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV41A0A0B4J266 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV41A0A0B4J266 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 AC138907.5-202ENST00000569484 235 ntBASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV41A0A0B4J266 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 AC010141.2-201ENST00000452426 721 ntBASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 AP001160.3-201ENST00000601484 763 ntBASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 AC008175.2-201ENST00000612840 297 ntBASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 LINC00565-201ENST00000562710 2331 ntBASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 AC244015.2-201ENST00000616358 1861 ntBASIC16.59■□□□□ 0.25
TRAV41A0A0B4J266 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRAV41A0A0B4J266 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV41A0A0B4J266 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
TRAV41A0A0B4J266 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 KRT18P61-201ENST00000585825 1298 ntBASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV41A0A0B4J266 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms