Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 SUN2-207ENST00000433561 444 ntTSL 416.49■□□□□ 0.231e-10■□□□□ 8.3
DDX3XO00571 SUN2-210ENST00000452294 621 ntTSL 416.08■□□□□ 0.161e-10■□□□□ 8.3
DDX3XO00571 SUN2-204ENST00000417332 545 ntTSL 415.54■□□□□ 0.081e-10■□□□□ 8.3
DDX3XO00571 RAB17-205ENST00000411462 663 ntTSL 215.47■□□□□ 0.071e-10■□□□□ 8.3
DDX3XO00571 SUN2-209ENST00000439339 546 ntTSL 415.33■□□□□ 0.041e-10■□□□□ 8.3
DDX3XO00571 RAB17-207ENST00000416106 587 ntTSL 314.87□□□□□ -0.031e-10■□□□□ 8.3
DDX3XO00571 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.11e-10■□□□□ 8.3
DDX3XO00571 SUN2-218ENST00000494273 746 ntTSL 313.43□□□□□ -0.261e-10■□□□□ 8.3
DDX3XO00571 POLR3E-210ENST00000564256 449 ntTSL 312.41□□□□□ -0.421e-10■□□□□ 8.3
DDX3XO00571 COX5B-204ENST00000494306 738 ntTSL 212.1□□□□□ -0.472e-35■□□□□ 8.3
DDX3XO00571 COX5B-203ENST00000491989 611 ntTSL 38.83□□□□□ -12e-35■□□□□ 8.3
DDX3XO00571 METTL9-204ENST00000562961 785 ntTSL 26.38□□□□□ -1.391e-10■□□□□ 8.3
DDX3XO00571 METTL9-208ENST00000568826 376 ntTSL 34.47□□□□□ -1.691e-10■□□□□ 8.3
DDX3XO00571 VPS29-209ENST00000551655 766 ntTSL 513.74□□□□□ -0.211e-16■□□□□ 8.3
DDX3XO00571 VPS29-208ENST00000550267 810 ntTSL 210.19□□□□□ -0.781e-16■□□□□ 8.3
DDX3XO00571 TMEM74B-203ENST00000481747 582 ntTSL 228.98■■■□□ 2.239e-8■□□□□ 8.2
DDX3XO00571 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.249e-8■□□□□ 8.2
DDX3XO00571 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.369e-8■□□□□ 8.2
DDX3XO00571 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.08■■□□□ 1.931e-15■□□□□ 8.2
DDX3XO00571 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.24■■□□□ 1.631e-15■□□□□ 8.2
DDX3XO00571 TANGO2-222ENST00000479679 894 ntTSL 225.2■■□□□ 1.621e-15■□□□□ 8.2
DDX3XO00571 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.54■■□□□ 1.521e-15■□□□□ 8.2
DDX3XO00571 TANGO2-215ENST00000450019 1689 ntTSL 524.25■■□□□ 1.471e-15■□□□□ 8.2
DDX3XO00571 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.471e-15■□□□□ 8.2
DDX3XO00571 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.71■■□□□ 1.391e-15■□□□□ 8.2
DDX3XO00571 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.95■■□□□ 1.261e-15■□□□□ 8.2
DDX3XO00571 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.86■■□□□ 1.251e-15■□□□□ 8.2
DDX3XO00571 TANGO2-208ENST00000430807 733 ntTSL 322.75■■□□□ 1.231e-15■□□□□ 8.2
DDX3XO00571 TANGO2-206ENST00000411907 568 ntTSL 422.5■■□□□ 1.191e-15■□□□□ 8.2
DDX3XO00571 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.97■■□□□ 1.111e-15■□□□□ 8.2
DDX3XO00571 TANGO2-211ENST00000434168 862 ntTSL 318.65■□□□□ 0.581e-15■□□□□ 8.2
DDX3XO00571 TANGO2-203ENST00000399807 2241 ntTSL 517.47■□□□□ 0.391e-15■□□□□ 8.2
DDX3XO00571 TANGO2-216ENST00000450664 570 ntTSL 416.77■□□□□ 0.281e-15■□□□□ 8.2
DDX3XO00571 TANGO2-218ENST00000462579 649 ntTSL 416.01■□□□□ 0.151e-15■□□□□ 8.2
DDX3XO00571 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.87■□□□□ 0.131e-15■□□□□ 8.2
DDX3XO00571 TANGO2-219ENST00000471707 745 ntTSL 515.74■□□□□ 0.111e-15■□□□□ 8.2
DDX3XO00571 TANGO2-213ENST00000444651 847 ntTSL 314.54□□□□□ -0.081e-15■□□□□ 8.2
DDX3XO00571 TANGO2-220ENST00000475446 557 ntTSL 414.3□□□□□ -0.121e-15■□□□□ 8.2
DDX3XO00571 TANGO2-223ENST00000484373 3109 ntTSL 414.03□□□□□ -0.161e-15■□□□□ 8.2
DDX3XO00571 TANGO2-224ENST00000485715 617 ntTSL 513.69□□□□□ -0.221e-15■□□□□ 8.2
DDX3XO00571 TANGO2-209ENST00000432198 585 ntTSL 412.2□□□□□ -0.461e-15■□□□□ 8.2
DDX3XO00571 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)9.22□□□□□ -0.938e-59■□□□□ 8.2
DDX3XO00571 BACH1-205ENST00000447177 751 ntTSL 213.47□□□□□ -0.252e-14■□□□□ 8.2
DDX3XO00571 BACH1-204ENST00000435072 692 ntTSL 313.42□□□□□ -0.262e-14■□□□□ 8.2
DDX3XO00571 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC11.52□□□□□ -0.572e-14■□□□□ 8.2
DDX3XO00571 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC9.59□□□□□ -0.872e-14■□□□□ 8.2
DDX3XO00571 BACH1-206ENST00000451655 777 ntTSL 38.86□□□□□ -0.992e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.72□□□□□ -1.012e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-210ENST00000529826 2423 ntTSL 58.66□□□□□ -1.022e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-208ENST00000528229 573 ntTSL 28.44□□□□□ -1.062e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-216ENST00000532384 3237 ntTSL 57.98□□□□□ -1.132e-14■□□□□ 8.2
DDX3XO00571 LINC00958-206ENST00000532541 1124 ntTSL 37.95□□□□□ -1.142e-14■□□□□ 8.2
DDX3XO00571 LINC00958-207ENST00000534477 888 ntTSL 37.95□□□□□ -1.142e-14■□□□□ 8.2
DDX3XO00571 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.86□□□□□ -1.152e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.78□□□□□ -1.482e-14■□□□□ 8.2
DDX3XO00571 LINC00958-205ENST00000531402 590 ntTSL 45.41□□□□□ -1.542e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.622e-14■□□□□ 8.2
DDX3XO00571 BACH1-212ENST00000548467 217 ntTSL 24.52□□□□□ -1.692e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-219ENST00000534269 4239 ntTSL 1 (best)4.46□□□□□ -1.72e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.72e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.762e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-212ENST00000530429 3167 ntTSL 53.79□□□□□ -1.82e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.43□□□□□ -1.862e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-206ENST00000527613 5640 ntTSL 1 (best)3.24□□□□□ -1.892e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-224ENST00000640069 7719 ntTSL 51.6□□□□□ -2.152e-14■□□□□ 8.2
DDX3XO00571 FDPS-213ENST00000489003 976 ntTSL 215.85■□□□□ 0.131e-11■□□□□ 8.2
DDX3XO00571 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.041e-11■□□□□ 8.2
DDX3XO00571 FDPS-211ENST00000477057 741 ntTSL 213.1□□□□□ -0.311e-11■□□□□ 8.2
DDX3XO00571 CDHR3-213ENST00000488386 540 ntTSL 35.98□□□□□ -1.451e-11■□□□□ 8.2
DDX3XO00571 RPS4Y1-202ENST00000430575 811 ntTSL 35.59□□□□□ -1.511e-11■□□□□ 8.2
DDX3XO00571 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.561e-11■□□□□ 8.2
DDX3XO00571 FBLN1-211ENST00000451475 544 ntTSL 515.85■□□□□ 0.134e-23■□□□□ 8.2
DDX3XO00571 MLH1-208ENST00000442249 558 ntTSL 414.02□□□□□ -0.173e-13■□□□□ 8.2
DDX3XO00571 MLH1-214ENST00000457004 668 ntTSL 314.02□□□□□ -0.173e-13■□□□□ 8.2
DDX3XO00571 MLH1-211ENST00000454028 570 ntTSL 512.32□□□□□ -0.443e-13■□□□□ 8.2
DDX3XO00571 MLH1-205ENST00000432299 928 ntTSL 1 (best)11.01□□□□□ -0.653e-13■□□□□ 8.2
DDX3XO00571 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.73e-13■□□□□ 8.2
DDX3XO00571 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC10.24□□□□□ -0.773e-13■□□□□ 8.2
DDX3XO00571 MLH1-213ENST00000456676 2230 ntTSL 1 (best)7.61□□□□□ -1.193e-13■□□□□ 8.2
DDX3XO00571 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.99■□□□□ 0.314e-46■□□□□ 8.2
DDX3XO00571 NEDD8-208ENST00000560427 654 ntTSL 213.53□□□□□ -0.241e-12■□□□□ 8.2
DDX3XO00571 NEDD8-205ENST00000527046 847 ntTSL 211.36□□□□□ -0.591e-12■□□□□ 8.2
DDX3XO00571 SMAD4-215ENST00000592911 475 ntTSL 58.38□□□□□ -1.071e-12■□□□□ 8.2
DDX3XO00571 DNAJC6-207ENST00000494710 1621 ntTSL 525.78■■□□□ 1.724e-12■□□□□ 8.2
DDX3XO00571 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.44e-12■□□□□ 8.2
DDX3XO00571 MCRS1-213ENST00000551625 2450 ntTSL 1 (best)17.03■□□□□ 0.324e-12■□□□□ 8.2
DDX3XO00571 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.254e-12■□□□□ 8.2
DDX3XO00571 MCRS1-206ENST00000548596 894 ntTSL 214.31□□□□□ -0.124e-12■□□□□ 8.2
DDX3XO00571 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.174e-12■□□□□ 8.2
DDX3XO00571 LENG8-205ENST00000439657 1073 ntTSL 513.8□□□□□ -0.24e-12■□□□□ 8.2
DDX3XO00571 MCRS1-210ENST00000549528 646 ntTSL 311.86□□□□□ -0.514e-12■□□□□ 8.2
DDX3XO00571 MCRS1-205ENST00000548334 876 ntTSL 311.36□□□□□ -0.594e-12■□□□□ 8.2
DDX3XO00571 LENG8-204ENST00000436479 320 ntTSL 510.39□□□□□ -0.754e-12■□□□□ 8.2
DDX3XO00571 DNAJC6-204ENST00000463018 546 ntTSL 36.04□□□□□ -1.444e-12■□□□□ 8.2
DDX3XO00571 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC10.77□□□□□ -0.694e-11■□□□□ 8.2
DDX3XO00571 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.47□□□□□ -0.894e-11■□□□□ 8.2
DDX3XO00571 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.71□□□□□ -1.824e-11■□□□□ 8.2
DDX3XO00571 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.824e-11■□□□□ 8.2
DDX3XO00571 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.711e-13■□□□□ 8.2
DDX3XO00571 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)24.04■■□□□ 1.447e-32■□□□□ 8.2
Retrieved 100 of 47,714 protein–RNA pairs in 5046.6 ms