Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC244015.2-201ENST00000616358 1861 ntBASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC004854.2-201ENST00000608450 1441 ntBASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC104771.1-201ENST00000603335 964 ntBASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 AC026471.6-201ENST00000622954 1905 ntBASIC21.16■□□□□ 0.98
PCDHB1Q9Y5F3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AP006587.3-201ENST00000525742 1516 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AP004607.4-201ENST00000530158 1459 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AC009237.3-201ENST00000393279 1427 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AC026185.1-201ENST00000445748 174 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHB1Q9Y5F3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHB1Q9Y5F3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 BID-214ENST00000617586 542 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB1Q9Y5F3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB1Q9Y5F3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB1Q9Y5F3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 BX005040.4-201ENST00000637145 1518 ntBASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 AL355802.2-201ENST00000402069 882 ntBASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 CROCCP5-201ENST00000436658 830 ntBASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 AC006970.2-201ENST00000450065 779 ntBASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms