Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 AP001330.3-201ENST00000520123 633 ntBASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF11Q9Y3C5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 AP006587.3-201ENST00000525742 1516 ntBASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 EDA-201ENST00000338901 1233 ntBASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 AC027682.1-201ENST00000562846 899 ntBASIC20.58■□□□□ 0.89
RNF11Q9Y3C5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF11Q9Y3C5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF11Q9Y3C5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 RNF165-205ENST00000588679 2904 ntBASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 AL355001.2-201ENST00000620617 1191 ntBASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF11Q9Y3C5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 AF213884.3-201ENST00000563833 479 ntBASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 AL031432.3-201ENST00000607698 485 ntBASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF11Q9Y3C5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 MIR939-201ENST00000401314 82 ntBASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF11Q9Y3C5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms