Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 AC026471.6-201ENST00000622954 1905 ntBASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.34■□□□□ 0.69
RPH3AQ9Y2J0 FAM99A-202ENST00000538190 1989 ntBASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPH3AQ9Y2J0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 AP004607.4-201ENST00000530158 1459 ntBASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.33■□□□□ 0.68
RPH3AQ9Y2J0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 KRT18P61-201ENST00000585825 1298 ntBASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 KRT87P-202ENST00000534226 1464 ntBASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPH3AQ9Y2J0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPH3AQ9Y2J0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 LINC00565-201ENST00000562710 2331 ntBASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 AC004911.1-201ENST00000416316 871 ntBASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPH3AQ9Y2J0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms