Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AP004607.4-201ENST00000530158 1459 ntBASIC19.66■□□□□ 0.74
DTX4Q9Y2E6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 EEF1DP3-203ENST00000566025 782 ntBASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX4Q9Y2E6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DTX4Q9Y2E6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DTX4Q9Y2E6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 AC104187.1-201ENST00000607510 612 ntBASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 MIR5787-201ENST00000611784 55 ntBASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX4Q9Y2E6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 KRT18P5-201ENST00000436075 1291 ntBASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 NTF6G-201ENST00000591094 616 ntBASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
DTX4Q9Y2E6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 AC007375.3-201ENST00000600936 2314 ntBASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 AL162430.1-201ENST00000480705 870 ntBASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 AC053503.5-201ENST00000601508 636 ntBASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.61■□□□□ 0.73
DTX4Q9Y2E6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms