Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 MTDHP1-201ENST00000605323 784 ntBASIC34.33■■■■□ 3.09
RIMBP3Q9UFD9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
RIMBP3Q9UFD9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.31■■■■□ 3.08
RIMBP3Q9UFD9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
RIMBP3Q9UFD9 AC006557.6-201ENST00000623071 864 ntBASIC34.3■■■■□ 3.08
RIMBP3Q9UFD9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 HES2-205ENST00000487437 968 ntTSL 3 BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC34.29■■■■□ 3.08
RIMBP3Q9UFD9 MMP23A-201ENST00000234610 1017 ntBASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 NMU-205ENST00000511469 756 ntTSL 3 BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 AC243732.1-201ENST00000612648 864 ntBASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
RIMBP3Q9UFD9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 AC239809.2-201ENST00000415381 517 ntBASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC34.27■■■■□ 3.08
RIMBP3Q9UFD9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC34.26■■■■□ 3.08
RIMBP3Q9UFD9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
RIMBP3Q9UFD9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 DUSP8P3-201ENST00000399571 1760 ntBASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC34.26■■■■□ 3.07
RIMBP3Q9UFD9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 AC079630.1-202ENST00000618127 1840 ntBASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
RIMBP3Q9UFD9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 RARRES2P10-201ENST00000564312 460 ntBASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 AC005363.2-201ENST00000618631 242 ntBASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.24■■■■□ 3.07
RIMBP3Q9UFD9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
RIMBP3Q9UFD9 DUX4L26-201ENST00000489078 1255 ntBASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 AC026471.5-201ENST00000615068 467 ntBASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 AC120498.10-201ENST00000621827 505 ntBASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC34.22■■■■□ 3.07
RIMBP3Q9UFD9 KRT8P9-201ENST00000558927 1449 ntBASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms