Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NCF1B-203ENST00000435988 1254 ntBASIC20.99■□□□□ 0.95
SPASTQ9UBP0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 AL109923.1-201ENST00000618799 583 ntBASIC20.99■□□□□ 0.95
SPASTQ9UBP0 MYCNOS-205ENST00000641950 531 ntBASIC20.99■□□□□ 0.95
SPASTQ9UBP0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
SPASTQ9UBP0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 AC138907.5-202ENST00000569484 235 ntBASIC20.98■□□□□ 0.95
SPASTQ9UBP0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SPASTQ9UBP0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 AC010141.2-201ENST00000452426 721 ntBASIC20.97■□□□□ 0.95
SPASTQ9UBP0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 KRT18P20-201ENST00000548986 1279 ntBASIC20.97■□□□□ 0.95
SPASTQ9UBP0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPASTQ9UBP0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 GPX1P1-201ENST00000388829 606 ntBASIC20.96■□□□□ 0.95
SPASTQ9UBP0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AC007322.1-201ENST00000426983 750 ntBASIC20.96■□□□□ 0.95
SPASTQ9UBP0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 DUX4L16-201ENST00000555130 1264 ntBASIC20.96■□□□□ 0.95
SPASTQ9UBP0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 LINC00565-201ENST00000562710 2331 ntBASIC20.96■□□□□ 0.95
SPASTQ9UBP0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPASTQ9UBP0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.95■□□□□ 0.95
SPASTQ9UBP0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SPASTQ9UBP0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SPASTQ9UBP0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPASTQ9UBP0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms