Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 AP005435.1-201ENST00000529293 1178 ntBASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 LINC01006-201ENST00000333319 2292 ntBASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 FEM1AP1-201ENST00000431297 1995 ntBASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 DUX4L19-201ENST00000557448 1267 ntBASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.53□□□□□ -0.08
CDC42SE2Q9NRR3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 SYT6-210ENST00000641643 1587 ntBASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42SE2Q9NRR3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE2Q9NRR3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 AL512631.2-201ENST00000604634 923 ntBASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 AL035685.1-201ENST00000636663 812 ntBASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 AP006587.3-201ENST00000525742 1516 ntBASIC14.51□□□□□ -0.09
CDC42SE2Q9NRR3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE2Q9NRR3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms