Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AC055733.4-201ENST00000638462 1354 ntBASIC19.61■□□□□ 0.73
POLE3Q9NRF9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AC012414.1-201ENST00000556676 535 ntBASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AL354811.1-201ENST00000610286 706 ntBASIC19.61■□□□□ 0.73
POLE3Q9NRF9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 AC005224.4-201ENST00000583262 1652 ntBASIC19.61■□□□□ 0.73
POLE3Q9NRF9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.61■□□□□ 0.73
POLE3Q9NRF9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.6■□□□□ 0.73
POLE3Q9NRF9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 AC142381.2-201ENST00000566120 298 ntBASIC19.6■□□□□ 0.73
POLE3Q9NRF9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLE3Q9NRF9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
POLE3Q9NRF9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLE3Q9NRF9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
POLE3Q9NRF9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
POLE3Q9NRF9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
POLE3Q9NRF9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.58■□□□□ 0.73
POLE3Q9NRF9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.58■□□□□ 0.72
POLE3Q9NRF9 AL358852.1-201ENST00000623174 1268 ntBASIC19.58■□□□□ 0.72
POLE3Q9NRF9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.58■□□□□ 0.72
POLE3Q9NRF9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLE3Q9NRF9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLE3Q9NRF9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLE3Q9NRF9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 AC005837.3-201ENST00000612163 286 ntBASIC19.57■□□□□ 0.72
POLE3Q9NRF9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLE3Q9NRF9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.56■□□□□ 0.72
POLE3Q9NRF9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms