Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 TERF1P2-201ENST00000583350 1212 ntBASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.18■□□□□ 0.82
NECTIN3Q9NQS3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L2-201ENST00000561772 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 MIR5787-201ENST00000611784 55 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L6-201ENST00000626483 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L1-201ENST00000627662 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L8-201ENST00000629013 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L3-201ENST00000630187 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L7-201ENST00000630678 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 DUX4L5-201ENST00000630834 1275 ntBASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.17■□□□□ 0.82
NECTIN3Q9NQS3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 AC005224.4-201ENST00000583262 1652 ntBASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 KRT18P14-201ENST00000534205 1250 ntBASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 AC009237.3-201ENST00000393279 1427 ntBASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.16■□□□□ 0.82
NECTIN3Q9NQS3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 AC034268.1-201ENST00000441047 882 ntBASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN3Q9NQS3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
NECTIN3Q9NQS3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NECTIN3Q9NQS3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms