Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.03■□□□□ 0.48
GCM1Q9NP62 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GCM1Q9NP62 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GCM1Q9NP62 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GCM1Q9NP62 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GCM1Q9NP62 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.02■□□□□ 0.48
GCM1Q9NP62 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GCM1Q9NP62 EP400NL-214ENST00000641289 2402 ntBASIC18.02■□□□□ 0.47
GCM1Q9NP62 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.02■□□□□ 0.47
GCM1Q9NP62 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GCM1Q9NP62 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.02■□□□□ 0.47
GCM1Q9NP62 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GCM1Q9NP62 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GCM1Q9NP62 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GCM1Q9NP62 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
GCM1Q9NP62 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 NTF6G-201ENST00000591094 616 ntBASIC18.01■□□□□ 0.47
GCM1Q9NP62 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 AC026471.6-201ENST00000622954 1905 ntBASIC18.01■□□□□ 0.47
GCM1Q9NP62 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.01■□□□□ 0.47
GCM1Q9NP62 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GCM1Q9NP62 KRT87P-202ENST00000534226 1464 ntBASIC18.01■□□□□ 0.47
GCM1Q9NP62 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
GCM1Q9NP62 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18■□□□□ 0.47
GCM1Q9NP62 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
GCM1Q9NP62 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GCM1Q9NP62 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18■□□□□ 0.47
GCM1Q9NP62 KRT18P5-201ENST00000436075 1291 ntBASIC18■□□□□ 0.47
GCM1Q9NP62 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18■□□□□ 0.47
GCM1Q9NP62 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GCM1Q9NP62 C11orf96-202ENST00000528572 1834 ntBASIC18■□□□□ 0.47
GCM1Q9NP62 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GCM1Q9NP62 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GCM1Q9NP62 AC003102.1-202ENST00000563394 1796 ntBASIC17.99■□□□□ 0.47
GCM1Q9NP62 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GCM1Q9NP62 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GCM1Q9NP62 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GCM1Q9NP62 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 AP004607.4-201ENST00000530158 1459 ntBASIC17.99■□□□□ 0.47
GCM1Q9NP62 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GCM1Q9NP62 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.99■□□□□ 0.47
GCM1Q9NP62 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.98■□□□□ 0.47
GCM1Q9NP62 AC004854.2-201ENST00000608450 1441 ntBASIC17.98■□□□□ 0.47
GCM1Q9NP62 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GCM1Q9NP62 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GCM1Q9NP62 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.98■□□□□ 0.47
GCM1Q9NP62 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GCM1Q9NP62 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms