Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VIPAS39Q9H9C1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VIPAS39Q9H9C1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VIPAS39Q9H9C1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VIPAS39Q9H9C1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.65■■□□□ 1.06
VIPAS39Q9H9C1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.64■■□□□ 1.06
VIPAS39Q9H9C1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VIPAS39Q9H9C1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
VIPAS39Q9H9C1 AC005703.6-201ENST00000623265 1329 ntBASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 AL031602.1-201ENST00000633169 911 ntBASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VIPAS39Q9H9C1 AC098818.2-201ENST00000564925 2320 ntBASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 AC112907.3-201ENST00000577781 2400 ntBASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VIPAS39Q9H9C1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms