Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 BX842568.3-201ENST00000418104 571 ntBASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR2J3Q9H1A7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 AP006587.3-201ENST00000525742 1516 ntBASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 AC003102.1-202ENST00000563394 1796 ntBASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J3Q9H1A7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J3Q9H1A7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 AC133561.4-201ENST00000566112 224 ntBASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms