Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-2Q9C056 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-2Q9C056 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 AL158211.5-201ENST00000623583 2518 ntBASIC17.09■□□□□ 0.33
NKX6-2Q9C056 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 AC011551.1-201ENST00000614101 683 ntBASIC17.09■□□□□ 0.33
NKX6-2Q9C056 AC131274.2-201ENST00000580697 1507 ntBASIC17.09■□□□□ 0.33
NKX6-2Q9C056 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-2Q9C056 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-2Q9C056 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 ABHD17AP4-201ENST00000411545 909 ntBASIC17.08■□□□□ 0.32
NKX6-2Q9C056 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 AC018755.3-202ENST00000596210 929 ntBASIC17.08■□□□□ 0.32
NKX6-2Q9C056 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX6-2Q9C056 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 AC004408.2-201ENST00000623613 2777 ntBASIC17.07■□□□□ 0.32
NKX6-2Q9C056 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 TNXA-203ENST00000507684 2038 ntBASIC17.07■□□□□ 0.32
NKX6-2Q9C056 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-2Q9C056 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 AC087393.1-201ENST00000582896 145 ntBASIC17.06■□□□□ 0.32
NKX6-2Q9C056 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-2Q9C056 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 AL353803.4-201ENST00000565882 1934 ntBASIC17.05■□□□□ 0.32
NKX6-2Q9C056 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-2Q9C056 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms