Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM2Q9C040 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 TSPY26P-201ENST00000476365 1326 ntBASIC19.42■□□□□ 0.7
TRIM2Q9C040 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM2Q9C040 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM2Q9C040 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
TRIM2Q9C040 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM2Q9C040 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 RARRES2P6-201ENST00000567333 442 ntBASIC19.41■□□□□ 0.7
TRIM2Q9C040 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM2Q9C040 FEM1AP4-201ENST00000443167 1987 ntBASIC19.41■□□□□ 0.7
TRIM2Q9C040 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
TRIM2Q9C040 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM2Q9C040 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TRIM2Q9C040 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM2Q9C040 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 AC105233.4-201ENST00000642045 216 ntBASIC19.4■□□□□ 0.7
TRIM2Q9C040 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM2Q9C040 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM2Q9C040 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM2Q9C040 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM2Q9C040 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM2Q9C040 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRIM2Q9C040 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM2Q9C040 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.38■□□□□ 0.69
TRIM2Q9C040 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM2Q9C040 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM2Q9C040 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM2Q9C040 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM2Q9C040 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM2Q9C040 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM2Q9C040 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM2Q9C040 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM2Q9C040 AC005229.4-201ENST00000610085 2198 ntBASIC19.37■□□□□ 0.69
TRIM2Q9C040 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM2Q9C040 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 MIR572-201ENST00000384983 95 ntBASIC19.36■□□□□ 0.69
TRIM2Q9C040 AC026271.2-201ENST00000428091 497 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms