Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 APTR-205ENST00000447009 902 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 EEF1DP3-203ENST00000566025 782 ntBASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 AC005181.1-201ENST00000604782 1256 ntBASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
KRTAP4-3Q9BYR4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 GUSBP5-202ENST00000510805 1989 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 C11orf96-202ENST00000528572 1834 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC007322.1-201ENST00000426983 750 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC093787.1-201ENST00000450396 207 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC138907.5-202ENST00000569484 235 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC010536.3-201ENST00000620306 533 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 AC092053.2-201ENST00000640557 1818 ntBASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
KRTAP4-3Q9BYR4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
KRTAP4-3Q9BYR4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms