Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
YIPF4Q9BSR8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 MIR572-201ENST00000384983 95 ntBASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YIPF4Q9BSR8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.83■□□□□ 0.77
YIPF4Q9BSR8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.83■□□□□ 0.76
YIPF4Q9BSR8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
YIPF4Q9BSR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
YIPF4Q9BSR8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
YIPF4Q9BSR8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF4Q9BSR8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF4Q9BSR8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 BX005040.4-201ENST00000637145 1518 ntBASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF4Q9BSR8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms