Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDNQ99608 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
NDNQ99608 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
NDNQ99608 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NDNQ99608 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDNQ99608 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.15■□□□□ 0.98
NDNQ99608 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NDNQ99608 AC027682.1-201ENST00000562846 899 ntBASIC21.15■□□□□ 0.98
NDNQ99608 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDNQ99608 FEM1AP4-201ENST00000443167 1987 ntBASIC21.15■□□□□ 0.98
NDNQ99608 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDNQ99608 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
NDNQ99608 AP006587.3-201ENST00000525742 1516 ntBASIC21.14■□□□□ 0.98
NDNQ99608 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NDNQ99608 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NDNQ99608 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
NDNQ99608 TSPY26P-201ENST00000476365 1326 ntBASIC21.14■□□□□ 0.97
NDNQ99608 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.14■□□□□ 0.97
NDNQ99608 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.14■□□□□ 0.97
NDNQ99608 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
NDNQ99608 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.14■□□□□ 0.97
NDNQ99608 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDNQ99608 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NDNQ99608 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.13■□□□□ 0.97
NDNQ99608 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 AF213884.3-201ENST00000563833 479 ntBASIC21.13■□□□□ 0.97
NDNQ99608 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NDNQ99608 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDNQ99608 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NDNQ99608 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
NDNQ99608 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NDNQ99608 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 EDA-201ENST00000338901 1233 ntBASIC21.12■□□□□ 0.97
NDNQ99608 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
NDNQ99608 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.12■□□□□ 0.97
NDNQ99608 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDNQ99608 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.12■□□□□ 0.97
NDNQ99608 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NDNQ99608 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NDNQ99608 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.11■□□□□ 0.97
NDNQ99608 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDNQ99608 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDNQ99608 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NDNQ99608 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDNQ99608 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.11■□□□□ 0.97
NDNQ99608 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.11■□□□□ 0.97
NDNQ99608 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NDNQ99608 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.11■□□□□ 0.97
NDNQ99608 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.11■□□□□ 0.97
NDNQ99608 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NDNQ99608 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NDNQ99608 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
NDNQ99608 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NDNQ99608 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NDNQ99608 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NDNQ99608 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.1■□□□□ 0.97
NDNQ99608 MIR939-201ENST00000401314 82 ntBASIC21.1■□□□□ 0.97
NDNQ99608 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDNQ99608 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.1■□□□□ 0.97
NDNQ99608 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.1■□□□□ 0.97
NDNQ99608 AL355001.2-201ENST00000620617 1191 ntBASIC21.1■□□□□ 0.97
NDNQ99608 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NDNQ99608 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.09■□□□□ 0.97
NDNQ99608 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.09■□□□□ 0.97
NDNQ99608 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.09■□□□□ 0.97
NDNQ99608 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 AL031432.3-201ENST00000607698 485 ntBASIC21.09■□□□□ 0.97
NDNQ99608 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDNQ99608 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms