Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.62■■■□□ 2.49
SCAF11Q99590 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.62■■■□□ 2.49
SCAF11Q99590 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
SCAF11Q99590 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF11Q99590 UBE2SP1-201ENST00000450587 669 ntBASIC30.61■■■□□ 2.49
SCAF11Q99590 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.61■■■□□ 2.49
SCAF11Q99590 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF11Q99590 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
SCAF11Q99590 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.61■■■□□ 2.49
SCAF11Q99590 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.6■■■□□ 2.49
SCAF11Q99590 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC30.6■■■□□ 2.49
SCAF11Q99590 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.6■■■□□ 2.49
SCAF11Q99590 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF11Q99590 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.6■■■□□ 2.49
SCAF11Q99590 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF11Q99590 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC30.59■■■□□ 2.49
SCAF11Q99590 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF11Q99590 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF11Q99590 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF11Q99590 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF11Q99590 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.59■■■□□ 2.49
SCAF11Q99590 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SCAF11Q99590 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.59■■■□□ 2.49
SCAF11Q99590 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SCAF11Q99590 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF11Q99590 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.58■■■□□ 2.49
SCAF11Q99590 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.58■■■□□ 2.49
SCAF11Q99590 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.58■■■□□ 2.49
SCAF11Q99590 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.58■■■□□ 2.49
SCAF11Q99590 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.58■■■□□ 2.49
SCAF11Q99590 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.58■■■□□ 2.49
SCAF11Q99590 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.58■■■□□ 2.49
SCAF11Q99590 AL034346.1-201ENST00000568244 1277 ntBASIC30.58■■■□□ 2.49
SCAF11Q99590 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.58■■■□□ 2.49
SCAF11Q99590 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.58■■■□□ 2.49
SCAF11Q99590 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.58■■■□□ 2.49
SCAF11Q99590 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF11Q99590 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SCAF11Q99590 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.58■■■□□ 2.49
SCAF11Q99590 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
SCAF11Q99590 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
SCAF11Q99590 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.57■■■□□ 2.48
SCAF11Q99590 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC30.57■■■□□ 2.48
SCAF11Q99590 AC008403.3-201ENST00000598924 454 ntBASIC30.57■■■□□ 2.48
SCAF11Q99590 AC073912.3-201ENST00000624414 853 ntBASIC30.57■■■□□ 2.48
SCAF11Q99590 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
SCAF11Q99590 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
SCAF11Q99590 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF11Q99590 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC30.57■■■□□ 2.48
SCAF11Q99590 RBM17P2-201ENST00000616397 1405 ntBASIC30.57■■■□□ 2.48
SCAF11Q99590 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.56■■■□□ 2.48
SCAF11Q99590 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SCAF11Q99590 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SCAF11Q99590 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF11Q99590 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
SCAF11Q99590 RNF121-214ENST00000533380 870 ntTSL 3 BASIC30.56■■■□□ 2.48
SCAF11Q99590 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.56■■■□□ 2.48
SCAF11Q99590 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.55■■■□□ 2.48
SCAF11Q99590 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF11Q99590 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SCAF11Q99590 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.54■■■□□ 2.48
SCAF11Q99590 MIR4497-201ENST00000583208 89 ntBASIC30.54■■■□□ 2.48
SCAF11Q99590 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.54■■■□□ 2.48
SCAF11Q99590 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.54■■■□□ 2.48
SCAF11Q99590 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
SCAF11Q99590 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SCAF11Q99590 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SCAF11Q99590 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.53■■■□□ 2.48
SCAF11Q99590 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SCAF11Q99590 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SCAF11Q99590 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.53■■■□□ 2.48
SCAF11Q99590 AC087742.1-201ENST00000575880 1738 ntBASIC30.53■■■□□ 2.48
SCAF11Q99590 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SCAF11Q99590 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.53■■■□□ 2.48
SCAF11Q99590 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms