Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.23■□□□□ 0.67
SPENQ96T58 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.23■□□□□ 0.67
SPENQ96T58 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPENQ96T58 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPENQ96T58 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.23■□□□□ 0.67
SPENQ96T58 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPENQ96T58 KRT17P1-201ENST00000399211 1546 ntBASIC19.23■□□□□ 0.67
SPENQ96T58 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.22■□□□□ 0.67
SPENQ96T58 AC016405.3-201ENST00000607710 860 ntBASIC19.22■□□□□ 0.67
SPENQ96T58 OR10C1-204ENST00000622521 1039 ntBASIC19.22■□□□□ 0.67
SPENQ96T58 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
SPENQ96T58 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.22■□□□□ 0.67
SPENQ96T58 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.22■□□□□ 0.67
SPENQ96T58 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.22■□□□□ 0.67
SPENQ96T58 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPENQ96T58 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.21■□□□□ 0.67
SPENQ96T58 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPENQ96T58 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.21■□□□□ 0.67
SPENQ96T58 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SPENQ96T58 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPENQ96T58 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.21■□□□□ 0.67
SPENQ96T58 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.21■□□□□ 0.67
SPENQ96T58 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPENQ96T58 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
SPENQ96T58 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.21■□□□□ 0.67
SPENQ96T58 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.21■□□□□ 0.67
SPENQ96T58 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.21■□□□□ 0.67
SPENQ96T58 AC010980.2-201ENST00000587099 1412 ntBASIC19.21■□□□□ 0.67
SPENQ96T58 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SPENQ96T58 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.2■□□□□ 0.66
SPENQ96T58 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 RPS2P4-201ENST00000476944 856 ntBASIC19.2■□□□□ 0.66
SPENQ96T58 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.2■□□□□ 0.66
SPENQ96T58 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.2■□□□□ 0.66
SPENQ96T58 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPENQ96T58 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPENQ96T58 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SPENQ96T58 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.2■□□□□ 0.66
SPENQ96T58 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SPENQ96T58 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.19■□□□□ 0.66
SPENQ96T58 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.19■□□□□ 0.66
SPENQ96T58 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.19■□□□□ 0.66
SPENQ96T58 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.19■□□□□ 0.66
SPENQ96T58 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 FAM210CP-201ENST00000445714 574 ntBASIC19.19■□□□□ 0.66
SPENQ96T58 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.19■□□□□ 0.66
SPENQ96T58 AC233263.1-201ENST00000578059 224 ntBASIC19.19■□□□□ 0.66
SPENQ96T58 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SPENQ96T58 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.19■□□□□ 0.66
SPENQ96T58 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.19■□□□□ 0.66
SPENQ96T58 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPENQ96T58 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.19■□□□□ 0.66
SPENQ96T58 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SPENQ96T58 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 AC003102.1-202ENST00000563394 1796 ntBASIC19.18■□□□□ 0.66
SPENQ96T58 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.18■□□□□ 0.66
SPENQ96T58 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.18■□□□□ 0.66
SPENQ96T58 AC073912.3-201ENST00000624414 853 ntBASIC19.18■□□□□ 0.66
SPENQ96T58 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.18■□□□□ 0.66
SPENQ96T58 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPENQ96T58 AL162412.1-201ENST00000567129 965 ntBASIC19.18■□□□□ 0.66
SPENQ96T58 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.18■□□□□ 0.66
SPENQ96T58 RCN1P1-201ENST00000400413 996 ntBASIC19.17■□□□□ 0.66
SPENQ96T58 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.17■□□□□ 0.66
SPENQ96T58 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
SPENQ96T58 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SPENQ96T58 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms