Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 AC026185.1-201ENST00000445748 174 ntBASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 AC231657.2-201ENST00000624556 255 ntBASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 RAP2CP1-201ENST00000605103 478 ntBASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDK5RAP1Q96SZ6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDK5RAP1Q96SZ6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 AC010536.3-201ENST00000620306 533 ntBASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 AC010542.4-201ENST00000563151 1910 ntBASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 AC026471.6-201ENST00000622954 1905 ntBASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP1Q96SZ6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 DUX4L16-201ENST00000555130 1264 ntBASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP1Q96SZ6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP1Q96SZ6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms