Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.01■□□□□ 0.79
BBS4Q96RK4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.01■□□□□ 0.79
BBS4Q96RK4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.01■□□□□ 0.79
BBS4Q96RK4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20■□□□□ 0.79
BBS4Q96RK4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20■□□□□ 0.79
BBS4Q96RK4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BBS4Q96RK4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20■□□□□ 0.79
BBS4Q96RK4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS4Q96RK4 MIR638-201ENST00000385237 100 ntBASIC20■□□□□ 0.79
BBS4Q96RK4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20■□□□□ 0.79
BBS4Q96RK4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
BBS4Q96RK4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20■□□□□ 0.79
BBS4Q96RK4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS4Q96RK4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20■□□□□ 0.79
BBS4Q96RK4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BBS4Q96RK4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS4Q96RK4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
BBS4Q96RK4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.99■□□□□ 0.79
BBS4Q96RK4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 AC105265.2-201ENST00000467189 838 ntBASIC19.99■□□□□ 0.79
BBS4Q96RK4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 AC012414.1-201ENST00000556676 535 ntBASIC19.99■□□□□ 0.79
BBS4Q96RK4 AL354811.1-201ENST00000610286 706 ntBASIC19.99■□□□□ 0.79
BBS4Q96RK4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 AC005224.4-201ENST00000583262 1652 ntBASIC19.99■□□□□ 0.79
BBS4Q96RK4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS4Q96RK4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.99■□□□□ 0.79
BBS4Q96RK4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 AL137060.1-201ENST00000618151 2648 ntBASIC19.98■□□□□ 0.79
BBS4Q96RK4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 AL358852.1-201ENST00000623174 1268 ntBASIC19.98■□□□□ 0.79
BBS4Q96RK4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
BBS4Q96RK4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BBS4Q96RK4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BBS4Q96RK4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BBS4Q96RK4 IRS3P-201ENST00000223076 1006 ntBASIC19.97■□□□□ 0.79
BBS4Q96RK4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BBS4Q96RK4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
BBS4Q96RK4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 AC055733.4-201ENST00000638462 1354 ntBASIC19.96■□□□□ 0.79
BBS4Q96RK4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.96■□□□□ 0.79
BBS4Q96RK4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
BBS4Q96RK4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BBS4Q96RK4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms