Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 AP004607.4-201ENST00000530158 1459 ntBASIC17.63■□□□□ 0.41
GAFA1Q96PS6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 KRT18P61-201ENST00000585825 1298 ntBASIC17.62■□□□□ 0.41
GAFA1Q96PS6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 MIR5787-201ENST00000611784 55 ntBASIC17.62■□□□□ 0.41
GAFA1Q96PS6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.62■□□□□ 0.41
GAFA1Q96PS6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 NTF6G-201ENST00000591094 616 ntBASIC17.61■□□□□ 0.41
GAFA1Q96PS6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 AC104187.1-201ENST00000607510 612 ntBASIC17.61■□□□□ 0.41
GAFA1Q96PS6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GAFA1Q96PS6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GAFA1Q96PS6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAFA1Q96PS6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms